Viral Genome SMARTSeq

VIRAL GENOME SMARTSEQ


  • Available from 1 to a batch of viral RNA or DNA genomes
  • Valid for De Novo sequencing or Comparative genomic approaches
  • Deep sequencing coverage (at least 30X)
  • Long read (up to 300 kb)
  • High quality of results (>99.6% base accuracy)
  • Ultra fast delivery time
  • Check our SMART guide to prepare your samples
  • Order Long read SMARTSeq IDs to label your samples
Viral genome long read sequencing
Viral genome long read sequencing
  • 3d generation sequencing technology
  • Latest sequencing chemistry available
  • Amplification free, no PCR bias
  • GC rich and homopolymers regions resolution
  • High quality de novo assembly
  • Detect all types of variants (from SNPs to large structural variants)
  • No need of sequencing primers
  • Real time signal acquisition
  • Proprietary bioinformatics pipepine ISO13485 compliants

Viral Genome SMARTSEQ step by step :

  1. Prepare the genomic DNA (or cDNA in case of RNA virus) in line with our concentration & volume requirements
  2. Label your sample with long read SMARTSeq lD.
  3. Connect to your SMARTAccount online.
  4. Select QUICK ORDER / Long read.
  5. Define the number, type, size of your sample, and upload your SampleSheet and your reference sequence in .fasta
  6. Protect your samples in a SMARTBox and write on the back of the box your name and order number.
  7. Contact us for local pick up support@smartlifebiosciences.com

SMARTLife Biosciences provides you with the WHOLE consensus and delivers the following results :

In case you do not provide us with a REFERENCE sequence in .fasta format :

– We follow a GENOME DE NOVO sequencing approach.

– We deliver you with the consensus sequence after De Novo assembly performed by proprietary BioIT pipeline ISO13485 compliant. 

You receive on personal & secure OneDrive :

  • Raw data (text sequences & quality scores in fastq. file)
  • Consensus sequence (.fasta file) obtained after De Novo assembly
  • Alignement of the reads produced to the consensus sequence (.bam file)
  • Structural annotations (assembly.gbk, genes.fasta,proteins.faa)
  • Quality metrics & histograms

In case you provide us with a reference sequence in .fasta format :

– We follow a COMPARATIVE GENOMICS sequencing approach.

– We deliver you with the consensus sequence after aligning quality trimmed & filtered long reads to your reference sequence. Alignement is performed with proprietary BioIT pipeline ISO13485 compliant. 

You receive on personal & secure OneDrive : 

  • Raw data (text sequences & quality scores in fastq. file)
  • Consensus sequence (.fasta file) obtained after alignement to the reference sequence
  • Table of consensus base quality & coverage at each position (.tsv and .xlsx files)
  • Structural annotations (assembly.gbk, genes.fasta,proteins.faa)
  • Quality metrics & histograms